Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
Mmp8O70138 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp8O70138 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp8O70138 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp8O70138 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Mmp8O70138 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Mmp8O70138 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Mmp8O70138 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Gm13689-201ENSMUST00000119360 685 ntBASIC16.7■□□□□ 0.26
Mmp8O70138 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Mmp8O70138 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Mmp8O70138 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Mmp8O70138 Mir6392-201ENSMUST00000184924 108 ntBASIC16.7■□□□□ 0.26
Mmp8O70138 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.7■□□□□ 0.26
Mmp8O70138 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.7■□□□□ 0.26
Mmp8O70138 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
Mmp8O70138 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.7■□□□□ 0.26
Mmp8O70138 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Mmp8O70138 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Mmp8O70138 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Mmp8O70138 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Mmp8O70138 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp8O70138 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.69■□□□□ 0.26
Mmp8O70138 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Mmp8O70138 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.69■□□□□ 0.26
Mmp8O70138 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Mmp8O70138 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Gm15678-201ENSMUST00000117573 960 ntBASIC16.69■□□□□ 0.26
Mmp8O70138 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.69■□□□□ 0.26
Mmp8O70138 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp8O70138 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Mmp8O70138 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Mmp8O70138 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.68■□□□□ 0.26
Mmp8O70138 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.68■□□□□ 0.26
Mmp8O70138 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.68■□□□□ 0.26
Mmp8O70138 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.68■□□□□ 0.26
Mmp8O70138 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.68■□□□□ 0.26
Mmp8O70138 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.68■□□□□ 0.26
Mmp8O70138 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Mmp8O70138 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Mmp8O70138 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp8O70138 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Mmp8O70138 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp8O70138 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp8O70138 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp8O70138 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.67■□□□□ 0.26
Mmp8O70138 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp8O70138 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.67■□□□□ 0.26
Mmp8O70138 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp8O70138 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms