Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.41□□□□□ -0.26
Npc1O35604 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Npc1O35604 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.41□□□□□ -0.26
Npc1O35604 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.41□□□□□ -0.26
Npc1O35604 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npc1O35604 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Npc1O35604 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.41□□□□□ -0.26
Npc1O35604 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Npc1O35604 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npc1O35604 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npc1O35604 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npc1O35604 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Npc1O35604 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npc1O35604 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Npc1O35604 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.41□□□□□ -0.26
Npc1O35604 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Npc1O35604 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Npc1O35604 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.4□□□□□ -0.26
Npc1O35604 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Npc1O35604 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.4□□□□□ -0.26
Npc1O35604 Gm37917-201ENSMUST00000194711 392 ntBASIC13.4□□□□□ -0.26
Npc1O35604 Gm8515-201ENSMUST00000194852 576 ntBASIC13.4□□□□□ -0.26
Npc1O35604 Gm17795-201ENSMUST00000214505 757 ntBASIC13.4□□□□□ -0.26
Npc1O35604 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.4□□□□□ -0.26
Npc1O35604 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Npc1O35604 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Npc1O35604 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Npc1O35604 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npc1O35604 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
Npc1O35604 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.4□□□□□ -0.27
Npc1O35604 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.4□□□□□ -0.27
Npc1O35604 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Npc1O35604 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.39□□□□□ -0.27
Npc1O35604 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Gm15240-201ENSMUST00000118156 720 ntBASIC13.39□□□□□ -0.27
Npc1O35604 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Npc1O35604 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.39□□□□□ -0.27
Npc1O35604 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.39□□□□□ -0.27
Npc1O35604 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.39□□□□□ -0.27
Npc1O35604 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.39□□□□□ -0.27
Npc1O35604 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.39□□□□□ -0.27
Npc1O35604 Gm27772-201ENSMUST00000184900 187 ntBASIC13.39□□□□□ -0.27
Npc1O35604 Gm18018-201ENSMUST00000198273 408 ntBASIC13.39□□□□□ -0.27
Npc1O35604 Gm5279-201ENSMUST00000199575 745 ntBASIC13.39□□□□□ -0.27
Npc1O35604 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Npc1O35604 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.39□□□□□ -0.27
Npc1O35604 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.39□□□□□ -0.27
Npc1O35604 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.39□□□□□ -0.27
Npc1O35604 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Npc1O35604 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npc1O35604 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms