Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav18A0A075B656 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.25□□□□□ -0.61
Trav18A0A075B656 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.25□□□□□ -0.61
Trav18A0A075B656 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Gm11594-201ENSMUST00000122313 162 ntBASIC11.25□□□□□ -0.61
Trav18A0A075B656 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trav18A0A075B656 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Mir497b-201ENSMUST00000093601 125 ntBASIC11.25□□□□□ -0.61
Trav18A0A075B656 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.25□□□□□ -0.61
Trav18A0A075B656 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav18A0A075B656 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Gm16476-201ENSMUST00000221544 139 ntBASIC11.24□□□□□ -0.61
Trav18A0A075B656 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.24□□□□□ -0.61
Trav18A0A075B656 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav18A0A075B656 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav18A0A075B656 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms