Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Matn2-206ENSMUST00000228570 2798 ntBASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Gm6912-201ENSMUST00000117218 544 ntBASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Gm4875-201ENSMUST00000118257 786 ntBASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Gm24420-201ENSMUST00000176676 59 ntBASIC13.75□□□□□ -0.21
H2afb2S4R1M3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
H2afb2S4R1M3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Gm27306-201ENSMUST00000183970 107 ntBASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
H2afb2S4R1M3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms