Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a2Q9JLR1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a2Q9JLR1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a2Q9JLR1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a2Q9JLR1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a2Q9JLR1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a2Q9JLR1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a2Q9JLR1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sec61a2Q9JLR1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Gm20949-201ENSMUST00000206478 952 ntBASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sec61a2Q9JLR1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Sec61a2Q9JLR1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Sec61a2Q9JLR1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.4□□□□□ -0.43
Sec61a2Q9JLR1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.4□□□□□ -0.43
Sec61a2Q9JLR1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sec61a2Q9JLR1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Gm24543-201ENSMUST00000103867 82 ntBASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Gm27533-201ENSMUST00000183800 152 ntBASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.39□□□□□ -0.43
Sec61a2Q9JLR1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a2Q9JLR1 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Sec61a2Q9JLR1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a2Q9JLR1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sec61a2Q9JLR1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sec61a2Q9JLR1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms