Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco4Q9JIS3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smco4Q9JIS3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco4Q9JIS3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Smco4Q9JIS3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smco4Q9JIS3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco4Q9JIS3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Gm8749-201ENSMUST00000117737 331 ntBASIC10.98□□□□□ -0.65
Smco4Q9JIS3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco4Q9JIS3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Gm21559-201ENSMUST00000220638 855 ntBASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Gm8587-201ENSMUST00000076538 843 ntBASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Smco4Q9JIS3 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms