Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.68□□□□□ -0.22
Tubb3Q9ERD7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Gm15653-201ENSMUST00000119247 907 ntBASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Gm12882-201ENSMUST00000121696 517 ntBASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Gm27631-201ENSMUST00000184163 466 ntBASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Gm46209-201ENSMUST00000217912 553 ntBASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Gm16476-201ENSMUST00000221544 139 ntBASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tubb3Q9ERD7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Gm45453-201ENSMUST00000211758 853 ntBASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tubb3Q9ERD7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms