Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Gm44719-201ENSMUST00000206404 149 ntBASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Mir125a-201ENSMUST00000083545 68 ntBASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp5Q9D7S9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Gm13015-201ENSMUST00000118674 204 ntBASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Gm11745-201ENSMUST00000121669 448 ntBASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Gm37714-201ENSMUST00000194742 342 ntBASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp5Q9D7S9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Gm6443-201ENSMUST00000203599 874 ntBASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp5Q9D7S9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Rprl2-201ENSMUST00000157150 290 ntBASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms