Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Chmp4cQ9D7F7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Chmp4cQ9D7F7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Gm24158-201ENSMUST00000175263 71 ntBASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Gm43575-201ENSMUST00000196420 516 ntBASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Dupd1-202ENSMUST00000224735 548 ntBASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4cQ9D7F7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Mir1897-201ENSMUST00000122581 272 ntBASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 AA543401-201ENSMUST00000164248 1269 ntBASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Gm7774-201ENSMUST00000200064 533 ntBASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Chmp4cQ9D7F7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Gm23935-201ENSMUST00000102303 57 ntBASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Gm24270-201ENSMUST00000102326 57 ntBASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Gm25287-201ENSMUST00000103846 110 ntBASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Gm22918-201ENSMUST00000103855 110 ntBASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Gm5566-201ENSMUST00000116118 459 ntBASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Gm6415-201ENSMUST00000118488 348 ntBASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Gm24245-201ENSMUST00000157318 57 ntBASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Gm6916-202ENSMUST00000205523 195 ntBASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chmp4cQ9D7F7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms