Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Stag1Q9D3E6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.33■□□□□ 0.21
Stag1Q9D3E6 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.33■□□□□ 0.21
Stag1Q9D3E6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Stag1Q9D3E6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Stag1Q9D3E6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Stag1Q9D3E6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Snora78-201ENSMUST00000158630 128 ntBASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Gm2445-201ENSMUST00000182798 989 ntBASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Gm6007-201ENSMUST00000208170 823 ntBASIC16.33■□□□□ 0.2
Stag1Q9D3E6 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Stag1Q9D3E6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Gm24644-201ENSMUST00000157114 139 ntBASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Stag1Q9D3E6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Stag1Q9D3E6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms