Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hdhd3Q9CYW4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Gm9103-201ENSMUST00000119371 405 ntBASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Gm12882-201ENSMUST00000121696 517 ntBASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.17□□□□□ -0.62
Hdhd3Q9CYW4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Gm25925-201ENSMUST00000158314 306 ntBASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Gm5864-201ENSMUST00000202263 970 ntBASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hdhd3Q9CYW4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hdhd3Q9CYW4 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms