Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Gm25925-201ENSMUST00000158314 306 ntBASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim13Q9CYB0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim13Q9CYB0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Gm44608-201ENSMUST00000206827 855 ntBASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Gm5364-201ENSMUST00000216789 889 ntBASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Gm15823-201ENSMUST00000064305 670 ntBASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim13Q9CYB0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim13Q9CYB0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim13Q9CYB0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim13Q9CYB0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim13Q9CYB0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim13Q9CYB0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms