Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm23616-201ENSMUST00000177797 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm25871-201ENSMUST00000177816 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm24752-201ENSMUST00000178240 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm24496-201ENSMUST00000178287 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm25649-201ENSMUST00000178476 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm25548-201ENSMUST00000178681 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm23147-201ENSMUST00000178841 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm26095-201ENSMUST00000179270 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm22171-201ENSMUST00000179283 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm23936-201ENSMUST00000179354 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm22619-201ENSMUST00000179516 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm25255-201ENSMUST00000179579 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm24755-201ENSMUST00000179691 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm26506-201ENSMUST00000179692 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm25086-201ENSMUST00000179931 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm23243-201ENSMUST00000180047 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm24659-201ENSMUST00000180212 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm24169-201ENSMUST00000180244 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm23689-201ENSMUST00000180354 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm27359-201ENSMUST00000184153 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm27785-201ENSMUST00000184268 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm27466-201ENSMUST00000184396 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm27703-201ENSMUST00000184836 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.17■□□□□ 0.18
Smc3Q9CW03 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm16476-201ENSMUST00000221544 139 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Smc3Q9CW03 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Gm24158-201ENSMUST00000175263 71 ntBASIC16.16■□□□□ 0.18
Smc3Q9CW03 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.16■□□□□ 0.18
Smc3Q9CW03 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Mir497b-201ENSMUST00000093601 125 ntBASIC16.16■□□□□ 0.18
Smc3Q9CW03 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smc3Q9CW03 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.15■□□□□ 0.18
Smc3Q9CW03 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.15■□□□□ 0.18
Smc3Q9CW03 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.15■□□□□ 0.18
Smc3Q9CW03 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Gm44719-201ENSMUST00000206404 149 ntBASIC16.15■□□□□ 0.18
Smc3Q9CW03 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smc3Q9CW03 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms