Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Gm9347-201ENSMUST00000211473 1607 ntBASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rpl39lQ9CQD0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Gm9109-201ENSMUST00000120254 1405 ntBASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Gm7935-201ENSMUST00000100555 1278 ntBASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Gm27742-201ENSMUST00000184667 60 ntBASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Gm37230-201ENSMUST00000194491 818 ntBASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 AC159106.1-201ENSMUST00000224421 690 ntBASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Gm20633-201ENSMUST00000176742 2831 ntBASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rpl39lQ9CQD0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Paupar-201ENSMUST00000194826 3482 ntBASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Gm44891-201ENSMUST00000208817 2223 ntBASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Gm15565-201ENSMUST00000118890 427 ntBASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Gm11780-201ENSMUST00000136880 516 ntBASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rpl39lQ9CQD0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms