Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prpf8Q99PV0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prpf8Q99PV0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prpf8Q99PV0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prpf8Q99PV0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prpf8Q99PV0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prpf8Q99PV0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prpf8Q99PV0 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.28□□□□□ -0.6
Prpf8Q99PV0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prpf8Q99PV0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.28□□□□□ -0.6
Prpf8Q99PV0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prpf8Q99PV0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Prpf8Q99PV0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prpf8Q99PV0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prpf8Q99PV0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Mir3547-201ENSMUST00000175461 88 ntBASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.27□□□□□ -0.6
Prpf8Q99PV0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Prpf8Q99PV0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Gm12928-201ENSMUST00000117115 573 ntBASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Gm3786-201ENSMUST00000202659 378 ntBASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Prpf8Q99PV0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Gm15236-201ENSMUST00000117309 379 ntBASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Gm24420-201ENSMUST00000176676 59 ntBASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Gm13385-201ENSMUST00000121089 220 ntBASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Gm43094-201ENSMUST00000196549 921 ntBASIC11.26□□□□□ -0.61
Prpf8Q99PV0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Gm18054-201ENSMUST00000207539 555 ntBASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Prpf8Q99PV0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms