Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm43908-201ENSMUST00000205074 1472 ntBASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Gm9550-201ENSMUST00000161130 862 ntBASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Gm27552-201ENSMUST00000183351 62 ntBASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Gm27844-201ENSMUST00000183613 62 ntBASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh15Q99PJ1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Gm13813-201ENSMUST00000120998 787 ntBASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Gm43830-201ENSMUST00000198760 1067 ntBASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Gm7848-201ENSMUST00000210739 718 ntBASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh15Q99PJ1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm11628-201ENSMUST00000117568 171 ntBASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm11930-201ENSMUST00000117788 190 ntBASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm6335-201ENSMUST00000118081 1194 ntBASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm7816-201ENSMUST00000119884 1194 ntBASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm15542-201ENSMUST00000121585 1194 ntBASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm27438-201ENSMUST00000183480 110 ntBASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm22058-201ENSMUST00000083393 310 ntBASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh15Q99PJ1 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh15Q99PJ1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms