Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.86□□□□□ -0.19
Cdk9Q99J95 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.86□□□□□ -0.19
Cdk9Q99J95 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.86□□□□□ -0.19
Cdk9Q99J95 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cdk9Q99J95 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.86□□□□□ -0.19
Cdk9Q99J95 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdk9Q99J95 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cdk9Q99J95 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdk9Q99J95 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.85□□□□□ -0.19
Cdk9Q99J95 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.85□□□□□ -0.19
Cdk9Q99J95 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Gm14494-201ENSMUST00000118786 435 ntBASIC13.84□□□□□ -0.19
Cdk9Q99J95 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Thap2-203ENSMUST00000218989 527 ntBASIC13.84□□□□□ -0.19
Cdk9Q99J95 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.84□□□□□ -0.19
Cdk9Q99J95 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdk9Q99J95 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdk9Q99J95 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdk9Q99J95 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdk9Q99J95 Pck2-205ENSMUST00000226352 2784 ntBASIC13.83□□□□□ -0.19
Cdk9Q99J95 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdk9Q99J95 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cdk9Q99J95 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Gm11594-201ENSMUST00000122313 162 ntBASIC13.83□□□□□ -0.2
Cdk9Q99J95 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Gm37935-201ENSMUST00000192012 982 ntBASIC13.83□□□□□ -0.2
Cdk9Q99J95 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms