Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Gm7063-201ENSMUST00000186840 981 ntBASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.37□□□□□ -0.11
Pcdha3Q91Y16 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Gm44855-201ENSMUST00000205725 362 ntBASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdha3Q91Y16 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Syt7-205ENSMUST00000224135 1557 ntBASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Gm7488-201ENSMUST00000117148 684 ntBASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms