Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb2Q91Y00 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Mir6392-201ENSMUST00000184924 108 ntBASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb2Q91Y00 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Gm2445-201ENSMUST00000182798 989 ntBASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb2Q91Y00 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Pcdhb2Q91Y00 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.58□□□□□ -0.07
Pcdhb2Q91Y00 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb2Q91Y00 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb2Q91Y00 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb2Q91Y00 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb2Q91Y00 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Pcdhb2Q91Y00 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
Pcdhb2Q91Y00 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms