Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm44608-201ENSMUST00000206827 855 ntBASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 AC154646.1-201ENSMUST00000225011 1092 ntBASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Gm14719-201ENSMUST00000121891 340 ntBASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Gm27437-201ENSMUST00000183429 107 ntBASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Gm42710-201ENSMUST00000200608 985 ntBASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Gm43596-201ENSMUST00000202818 884 ntBASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Gm17415-201ENSMUST00000096427 789 ntBASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Gm44441-201ENSMUST00000203642 2475 ntBASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb20Q91XZ9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Gm12585-201ENSMUST00000117307 290 ntBASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Gm4875-201ENSMUST00000118257 786 ntBASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Gm5392-201ENSMUST00000122189 789 ntBASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Lrp1b-212ENSMUST00000204204 798 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Gm46436-201ENSMUST00000221851 1294 ntBASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Gm38368-201ENSMUST00000193181 1335 ntBASIC13.61□□□□□ -0.23
Pcdhb20Q91XZ9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Gm10419-201ENSMUST00000100944 1671 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms