Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.57□□□□□ -0.24
Vsx1Q91V10 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Gm43118-201ENSMUST00000199149 775 ntBASIC13.57□□□□□ -0.24
Vsx1Q91V10 Gm43758-201ENSMUST00000199500 367 ntBASIC13.57□□□□□ -0.24
Vsx1Q91V10 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.57□□□□□ -0.24
Vsx1Q91V10 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.57□□□□□ -0.24
Vsx1Q91V10 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vsx1Q91V10 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.56□□□□□ -0.24
Vsx1Q91V10 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.56□□□□□ -0.24
Vsx1Q91V10 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.56□□□□□ -0.24
Vsx1Q91V10 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.56□□□□□ -0.24
Vsx1Q91V10 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.56□□□□□ -0.24
Vsx1Q91V10 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.56□□□□□ -0.24
Vsx1Q91V10 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vsx1Q91V10 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Gm13342-201ENSMUST00000121055 207 ntBASIC13.55□□□□□ -0.24
Vsx1Q91V10 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Gm27331-201ENSMUST00000183705 60 ntBASIC13.55□□□□□ -0.24
Vsx1Q91V10 Gm44397-201ENSMUST00000195950 113 ntBASIC13.55□□□□□ -0.24
Vsx1Q91V10 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vsx1Q91V10 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.55□□□□□ -0.24
Vsx1Q91V10 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vsx1Q91V10 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms