Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Gm18195-201ENSMUST00000207604 706 ntBASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.21□□□□□ -0.61
Nup35Q8R4R6 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.21□□□□□ -0.61
Nup35Q8R4R6 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nup35Q8R4R6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nup35Q8R4R6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nup35Q8R4R6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.21□□□□□ -0.62
Nup35Q8R4R6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Nup35Q8R4R6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Nup35Q8R4R6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
Nup35Q8R4R6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nup35Q8R4R6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
Nup35Q8R4R6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Nup35Q8R4R6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.21□□□□□ -0.62
Nup35Q8R4R6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Gm18737-201ENSMUST00000173594 937 ntBASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.2□□□□□ -0.62
Nup35Q8R4R6 AA619741-201ENSMUST00000195095 646 ntBASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Nup35Q8R4R6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Gm17971-201ENSMUST00000190239 806 ntBASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Gm18027-201ENSMUST00000218947 619 ntBASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nup35Q8R4R6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms