Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc58Q8R3Q6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Mir8098-201ENSMUST00000184011 137 ntBASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Gm44608-201ENSMUST00000206827 855 ntBASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc58Q8R3Q6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc58Q8R3Q6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc58Q8R3Q6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Ccdc58Q8R3Q6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Gm11452-201ENSMUST00000122376 690 ntBASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Mir5126-201ENSMUST00000175513 77 ntBASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.33□□□□□ -0.44
Ccdc58Q8R3Q6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms