Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf31Q8CCF0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf31Q8CCF0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Prpf31Q8CCF0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf31Q8CCF0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Prpf31Q8CCF0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf31Q8CCF0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf31Q8CCF0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf31Q8CCF0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf31Q8CCF0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf31Q8CCF0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.02■□□□□ -0
Prpf31Q8CCF0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Prpf31Q8CCF0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.02■□□□□ -0
Prpf31Q8CCF0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.02■□□□□ -0
Prpf31Q8CCF0 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.02■□□□□ -0
Prpf31Q8CCF0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf31Q8CCF0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf31Q8CCF0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Prpf31Q8CCF0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.02□□□□□ -0.01
Prpf31Q8CCF0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Prpf31Q8CCF0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf31Q8CCF0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf31Q8CCF0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Prpf31Q8CCF0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf31Q8CCF0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.02□□□□□ -0.01
Prpf31Q8CCF0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf31Q8CCF0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Gm13689-201ENSMUST00000119360 685 ntBASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Gm15806-201ENSMUST00000120696 955 ntBASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf31Q8CCF0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15□□□□□ -0.01
Prpf31Q8CCF0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Gm12416-201ENSMUST00000120911 1008 ntBASIC15□□□□□ -0.01
Prpf31Q8CCF0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15□□□□□ -0.01
Prpf31Q8CCF0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Gm26513-201ENSMUST00000181802 2489 ntBASIC15□□□□□ -0.01
Prpf31Q8CCF0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf31Q8CCF0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms