Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Gm15487-201ENSMUST00000122373 465 ntBASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trub1Q8C0D0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Gm9522-201ENSMUST00000182394 926 ntBASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trub1Q8C0D0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trub1Q8C0D0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trub1Q8C0D0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trub1Q8C0D0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trub1Q8C0D0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trub1Q8C0D0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trub1Q8C0D0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms