Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Mir1982-201ENSMUST00000157368 74 ntBASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Sh3rf2Q8BZT2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Gm15770-201ENSMUST00000117498 584 ntBASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Gm13612-201ENSMUST00000119276 390 ntBASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Gm27847-201ENSMUST00000183711 107 ntBASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Gm27375-201ENSMUST00000183799 107 ntBASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sh3rf2Q8BZT2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Sh3rf2Q8BZT2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sh3rf2Q8BZT2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sh3rf2Q8BZT2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 AY702102-202ENSMUST00000194651 1173 ntBASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Gm7561-201ENSMUST00000211203 886 ntBASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Gm6091-201ENSMUST00000098307 165 ntBASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sh3rf2Q8BZT2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms