Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Gm27680-201ENSMUST00000184192 160 ntBASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sp140Q6NSQ5 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Mir698-201ENSMUST00000102164 109 ntBASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Gm8927-201ENSMUST00000181978 981 ntBASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Gm27321-201ENSMUST00000185021 205 ntBASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Gm3222-201ENSMUST00000071282 990 ntBASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sp140Q6NSQ5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sp140Q6NSQ5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Sp140Q6NSQ5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sp140Q6NSQ5 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sp140Q6NSQ5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sp140Q6NSQ5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sp140Q6NSQ5 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Gm15393-201ENSMUST00000120499 219 ntBASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Gm14767-201ENSMUST00000121559 586 ntBASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sp140Q6NSQ5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 171 ms