Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Ift88Q61371 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ift88Q61371 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ift88Q61371 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.21■□□□□ 0.03
Ift88Q61371 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Ift88Q61371 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.21■□□□□ 0.03
Ift88Q61371 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ift88Q61371 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.21■□□□□ 0.03
Ift88Q61371 Gm43125-201ENSMUST00000201724 730 ntBASIC15.21■□□□□ 0.03
Ift88Q61371 Gm6916-202ENSMUST00000205523 195 ntBASIC15.21■□□□□ 0.03
Ift88Q61371 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ift88Q61371 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Mir497b-201ENSMUST00000093601 125 ntBASIC15.21■□□□□ 0.03
Ift88Q61371 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ift88Q61371 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ift88Q61371 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ift88Q61371 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ift88Q61371 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ift88Q61371 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ift88Q61371 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ift88Q61371 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.2■□□□□ 0.02
Ift88Q61371 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.2■□□□□ 0.02
Ift88Q61371 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ift88Q61371 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.2■□□□□ 0.02
Ift88Q61371 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ift88Q61371 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.2■□□□□ 0.02
Ift88Q61371 Mir6990-201ENSMUST00000183724 91 ntBASIC15.2■□□□□ 0.02
Ift88Q61371 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.2■□□□□ 0.02
Ift88Q61371 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Ift88Q61371 Dupd1-202ENSMUST00000224735 548 ntBASIC15.2■□□□□ 0.02
Ift88Q61371 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ift88Q61371 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ift88Q61371 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.2■□□□□ 0.02
Ift88Q61371 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ift88Q61371 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ift88Q61371 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ift88Q61371 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ift88Q61371 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ift88Q61371 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ift88Q61371 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ift88Q61371 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ift88Q61371 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ift88Q61371 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.19■□□□□ 0.02
Ift88Q61371 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ift88Q61371 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ift88Q61371 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ift88Q61371 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.19■□□□□ 0.02
Ift88Q61371 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ift88Q61371 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ift88Q61371 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ift88Q61371 Mir698-201ENSMUST00000102164 109 ntBASIC15.19■□□□□ 0.02
Ift88Q61371 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ift88Q61371 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ift88Q61371 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.19■□□□□ 0.02
Ift88Q61371 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.19■□□□□ 0.02
Ift88Q61371 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.19■□□□□ 0.02
Ift88Q61371 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.19■□□□□ 0.02
Ift88Q61371 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Ift88Q61371 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.19■□□□□ 0.02
Ift88Q61371 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.19■□□□□ 0.02
Ift88Q61371 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms