Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trim40Q3UWA4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Trim40Q3UWA4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Gm16198-201ENSMUST00000118766 670 ntBASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Thap2-203ENSMUST00000218989 527 ntBASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim40Q3UWA4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Gm12350-201ENSMUST00000121208 462 ntBASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Gm13597-201ENSMUST00000121239 375 ntBASIC12.88□□□□□ -0.35
Trim40Q3UWA4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Trim40Q3UWA4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Gm27301-201ENSMUST00000184012 127 ntBASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim40Q3UWA4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms