Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Gm37714-201ENSMUST00000194742 342 ntBASIC13.92□□□□□ -0.18
Ebf1Q07802 Gm19078-201ENSMUST00000206311 727 ntBASIC13.92□□□□□ -0.18
Ebf1Q07802 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.92□□□□□ -0.18
Ebf1Q07802 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.92□□□□□ -0.18
Ebf1Q07802 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ebf1Q07802 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ebf1Q07802 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.91□□□□□ -0.18
Ebf1Q07802 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.91□□□□□ -0.18
Ebf1Q07802 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.91□□□□□ -0.18
Ebf1Q07802 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.91□□□□□ -0.18
Ebf1Q07802 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.91□□□□□ -0.18
Ebf1Q07802 Gm15429-201ENSMUST00000151268 798 ntBASIC13.91□□□□□ -0.18
Ebf1Q07802 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.91□□□□□ -0.18
Ebf1Q07802 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ebf1Q07802 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ebf1Q07802 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.91□□□□□ -0.18
Ebf1Q07802 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.91□□□□□ -0.18
Ebf1Q07802 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ebf1Q07802 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Ebf1Q07802 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf1Q07802 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ebf1Q07802 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Gm13392-201ENSMUST00000117708 150 ntBASIC13.9□□□□□ -0.18
Ebf1Q07802 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Gm11524-201ENSMUST00000119349 807 ntBASIC13.9□□□□□ -0.18
Ebf1Q07802 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
Ebf1Q07802 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.9□□□□□ -0.18
Ebf1Q07802 Gm37424-201ENSMUST00000191727 561 ntBASIC13.9□□□□□ -0.18
Ebf1Q07802 Gm43094-201ENSMUST00000196549 921 ntBASIC13.9□□□□□ -0.18
Ebf1Q07802 Gm7561-201ENSMUST00000211203 886 ntBASIC13.9□□□□□ -0.18
Ebf1Q07802 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.9□□□□□ -0.18
Ebf1Q07802 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ebf1Q07802 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ebf1Q07802 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms