Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.85□□□□□ -0.03
Col9a2Q07643 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Col9a2Q07643 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.85□□□□□ -0.03
Col9a2Q07643 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.85□□□□□ -0.03
Col9a2Q07643 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col9a2Q07643 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Col9a2Q07643 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col9a2Q07643 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.84□□□□□ -0.03
Col9a2Q07643 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.84□□□□□ -0.03
Col9a2Q07643 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.84□□□□□ -0.03
Col9a2Q07643 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Gm15770-201ENSMUST00000117498 584 ntBASIC14.84□□□□□ -0.03
Col9a2Q07643 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Mir3102-201ENSMUST00000175555 104 ntBASIC14.84□□□□□ -0.03
Col9a2Q07643 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Gm27847-201ENSMUST00000183711 107 ntBASIC14.84□□□□□ -0.03
Col9a2Q07643 Gm27375-201ENSMUST00000183799 107 ntBASIC14.84□□□□□ -0.03
Col9a2Q07643 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.84□□□□□ -0.03
Col9a2Q07643 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.84□□□□□ -0.03
Col9a2Q07643 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col9a2Q07643 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
Col9a2Q07643 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Col9a2Q07643 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col9a2Q07643 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col9a2Q07643 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col9a2Q07643 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col9a2Q07643 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col9a2Q07643 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Col9a2Q07643 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Col9a2Q07643 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col9a2Q07643 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Col9a2Q07643 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.83□□□□□ -0.03
Col9a2Q07643 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.83□□□□□ -0.04
Col9a2Q07643 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.83□□□□□ -0.04
Col9a2Q07643 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Gm14660-201ENSMUST00000119809 575 ntBASIC14.83□□□□□ -0.04
Col9a2Q07643 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.83□□□□□ -0.04
Col9a2Q07643 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Gm27486-201ENSMUST00000184923 80 ntBASIC14.83□□□□□ -0.04
Col9a2Q07643 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.83□□□□□ -0.04
Col9a2Q07643 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.83□□□□□ -0.04
Col9a2Q07643 Gm17794-201ENSMUST00000220252 955 ntBASIC14.83□□□□□ -0.04
Col9a2Q07643 Gm17330-201ENSMUST00000221047 165 ntBASIC14.83□□□□□ -0.04
Col9a2Q07643 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Col9a2Q07643 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.83□□□□□ -0.04
Col9a2Q07643 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col9a2Q07643 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms