Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
VcpQ01853 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.67□□□□□ -0.06
VcpQ01853 Gm15198-201ENSMUST00000117283 177 ntBASIC14.67□□□□□ -0.06
VcpQ01853 Gm8062-201ENSMUST00000139696 444 ntBASIC14.67□□□□□ -0.06
VcpQ01853 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.67□□□□□ -0.06
VcpQ01853 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
VcpQ01853 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.67□□□□□ -0.06
VcpQ01853 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.67□□□□□ -0.06
VcpQ01853 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.67□□□□□ -0.06
VcpQ01853 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.67□□□□□ -0.06
VcpQ01853 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.67□□□□□ -0.06
VcpQ01853 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.67□□□□□ -0.06
VcpQ01853 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VcpQ01853 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
VcpQ01853 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.66□□□□□ -0.06
VcpQ01853 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.66□□□□□ -0.06
VcpQ01853 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.66□□□□□ -0.06
VcpQ01853 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Gm12390-201ENSMUST00000117897 397 ntBASIC14.66□□□□□ -0.06
VcpQ01853 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.66□□□□□ -0.06
VcpQ01853 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.66□□□□□ -0.06
VcpQ01853 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.66□□□□□ -0.06
VcpQ01853 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.66□□□□□ -0.06
VcpQ01853 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
VcpQ01853 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.66□□□□□ -0.06
VcpQ01853 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VcpQ01853 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.65□□□□□ -0.06
VcpQ01853 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.65□□□□□ -0.06
VcpQ01853 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.65□□□□□ -0.06
VcpQ01853 Gm15678-201ENSMUST00000117573 960 ntBASIC14.65□□□□□ -0.06
VcpQ01853 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.65□□□□□ -0.06
VcpQ01853 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.65□□□□□ -0.06
VcpQ01853 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.65□□□□□ -0.06
VcpQ01853 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.65□□□□□ -0.06
VcpQ01853 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.65□□□□□ -0.06
VcpQ01853 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
VcpQ01853 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Gm10478-201ENSMUST00000084451 396 ntBASIC14.65□□□□□ -0.06
VcpQ01853 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
VcpQ01853 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.65□□□□□ -0.06
VcpQ01853 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
VcpQ01853 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VcpQ01853 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms