Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.06□□□□□ -0.16
Ybx1P62960 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.06□□□□□ -0.16
Ybx1P62960 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ybx1P62960 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ybx1P62960 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.05□□□□□ -0.16
Ybx1P62960 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.05□□□□□ -0.16
Ybx1P62960 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.05□□□□□ -0.16
Ybx1P62960 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Proscos-202ENSMUST00000178990 666 ntBASIC14.05□□□□□ -0.16
Ybx1P62960 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Gm42550-201ENSMUST00000201553 960 ntBASIC14.05□□□□□ -0.16
Ybx1P62960 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.05□□□□□ -0.16
Ybx1P62960 Gm18473-201ENSMUST00000220543 868 ntBASIC14.05□□□□□ -0.16
Ybx1P62960 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Gm5161-201ENSMUST00000075243 853 ntBASIC14.05□□□□□ -0.16
Ybx1P62960 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.05□□□□□ -0.16
Ybx1P62960 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Ybx1P62960 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ybx1P62960 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ybx1P62960 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ybx1P62960 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.04□□□□□ -0.16
Ybx1P62960 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ybx1P62960 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.04□□□□□ -0.16
Ybx1P62960 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.04□□□□□ -0.16
Ybx1P62960 Gm27514-201ENSMUST00000183692 110 ntBASIC14.04□□□□□ -0.16
Ybx1P62960 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.04□□□□□ -0.16
Ybx1P62960 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.04□□□□□ -0.16
Ybx1P62960 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.04□□□□□ -0.16
Ybx1P62960 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ybx1P62960 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ybx1P62960 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ybx1P62960 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Gm12384-201ENSMUST00000119228 919 ntBASIC14.03□□□□□ -0.16
Ybx1P62960 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.03□□□□□ -0.16
Ybx1P62960 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.03□□□□□ -0.16
Ybx1P62960 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.03□□□□□ -0.16
Ybx1P62960 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.03□□□□□ -0.16
Ybx1P62960 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.03□□□□□ -0.16
Ybx1P62960 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ybx1P62960 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.03□□□□□ -0.16
Ybx1P62960 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.03□□□□□ -0.16
Ybx1P62960 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.03□□□□□ -0.16
Ybx1P62960 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ybx1P62960 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms