Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Gm28745-201ENSMUST00000190069 305 ntBASIC14.45□□□□□ -0.1
Usp46P62069 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp46P62069 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp46P62069 Rubie-203ENSMUST00000227803 2430 ntBASIC14.45□□□□□ -0.1
Usp46P62069 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp46P62069 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.45□□□□□ -0.1
Usp46P62069 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp46P62069 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp46P62069 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp46P62069 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp46P62069 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp46P62069 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.44□□□□□ -0.1
Usp46P62069 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Gm8584-201ENSMUST00000171982 758 ntBASIC14.44□□□□□ -0.1
Usp46P62069 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.44□□□□□ -0.1
Usp46P62069 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp46P62069 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Usp46P62069 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Usp46P62069 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp46P62069 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp46P62069 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp46P62069 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Usp46P62069 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.43□□□□□ -0.1
Usp46P62069 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Usp46P62069 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.43□□□□□ -0.1
Usp46P62069 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.43□□□□□ -0.1
Usp46P62069 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.43□□□□□ -0.1
Usp46P62069 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Usp46P62069 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.43□□□□□ -0.1
Usp46P62069 Gm35638-201ENSMUST00000220724 652 ntBASIC14.43□□□□□ -0.1
Usp46P62069 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Usp46P62069 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Usp46P62069 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp46P62069 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.43□□□□□ -0.1
Usp46P62069 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
Usp46P62069 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.43□□□□□ -0.1
Usp46P62069 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp46P62069 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp46P62069 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp46P62069 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp46P62069 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Usp46P62069 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms