Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Shmt1P50431 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Shmt1P50431 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shmt1P50431 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shmt1P50431 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Shmt1P50431 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shmt1P50431 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shmt1P50431 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shmt1P50431 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shmt1P50431 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Shmt1P50431 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shmt1P50431 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.52□□□□□ -0.09
Shmt1P50431 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.52□□□□□ -0.09
Shmt1P50431 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shmt1P50431 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Shmt1P50431 Gm13689-201ENSMUST00000119360 685 ntBASIC14.52□□□□□ -0.09
Shmt1P50431 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shmt1P50431 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.52□□□□□ -0.09
Shmt1P50431 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shmt1P50431 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Shmt1P50431 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shmt1P50431 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.52□□□□□ -0.09
Shmt1P50431 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shmt1P50431 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Shmt1P50431 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.52□□□□□ -0.09
Shmt1P50431 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.52□□□□□ -0.09
Shmt1P50431 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shmt1P50431 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shmt1P50431 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shmt1P50431 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Shmt1P50431 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shmt1P50431 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shmt1P50431 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Shmt1P50431 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shmt1P50431 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shmt1P50431 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shmt1P50431 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.52□□□□□ -0.09
Shmt1P50431 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.51□□□□□ -0.09
Shmt1P50431 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.51□□□□□ -0.09
Shmt1P50431 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.51□□□□□ -0.09
Shmt1P50431 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.51□□□□□ -0.09
Shmt1P50431 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.51□□□□□ -0.09
Shmt1P50431 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Shmt1P50431 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.51□□□□□ -0.09
Shmt1P50431 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.51□□□□□ -0.09
Shmt1P50431 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.51□□□□□ -0.09
Shmt1P50431 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Shmt1P50431 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.51□□□□□ -0.09
Shmt1P50431 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shmt1P50431 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Shmt1P50431 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Gm43433-201ENSMUST00000196573 481 ntBASIC14.5□□□□□ -0.09
Shmt1P50431 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.5□□□□□ -0.09
Shmt1P50431 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.5□□□□□ -0.09
Shmt1P50431 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Shmt1P50431 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Shmt1P50431 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Shmt1P50431 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shmt1P50431 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
Shmt1P50431 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.49□□□□□ -0.09
Shmt1P50431 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Shmt1P50431 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms