Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prox1P48437 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prox1P48437 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Prox1P48437 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Prox1P48437 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prox1P48437 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prox1P48437 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.21□□□□□ -0.29
Prox1P48437 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prox1P48437 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Prox1P48437 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prox1P48437 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prox1P48437 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prox1P48437 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Prox1P48437 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Prox1P48437 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prox1P48437 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prox1P48437 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prox1P48437 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Prox1P48437 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.21□□□□□ -0.29
Prox1P48437 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prox1P48437 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
Prox1P48437 Gm27920-201ENSMUST00000183953 96 ntBASIC13.21□□□□□ -0.29
Prox1P48437 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.21□□□□□ -0.29
Prox1P48437 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.21□□□□□ -0.29
Prox1P48437 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.21□□□□□ -0.29
Prox1P48437 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.21□□□□□ -0.29
Prox1P48437 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.21□□□□□ -0.29
Prox1P48437 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prox1P48437 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prox1P48437 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prox1P48437 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prox1P48437 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prox1P48437 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.2□□□□□ -0.3
Prox1P48437 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Prox1P48437 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.2□□□□□ -0.3
Prox1P48437 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Prox1P48437 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Prox1P48437 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.2□□□□□ -0.3
Prox1P48437 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Prox1P48437 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.2□□□□□ -0.3
Prox1P48437 Gm27702-201ENSMUST00000184512 56 ntBASIC13.2□□□□□ -0.3
Prox1P48437 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Prox1P48437 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.2□□□□□ -0.3
Prox1P48437 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Prox1P48437 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prox1P48437 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Prox1P48437 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.19□□□□□ -0.3
Prox1P48437 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.19□□□□□ -0.3
Prox1P48437 Gm11543-201ENSMUST00000120758 370 ntBASIC13.19□□□□□ -0.3
Prox1P48437 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Prox1P48437 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
Prox1P48437 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Prox1P48437 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.19□□□□□ -0.3
Prox1P48437 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prox1P48437 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms