Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps4bP46467 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Vps4bP46467 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.96□□□□□ -0.17
Vps4bP46467 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.96□□□□□ -0.17
Vps4bP46467 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.96□□□□□ -0.17
Vps4bP46467 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.96□□□□□ -0.17
Vps4bP46467 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Vps4bP46467 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
Vps4bP46467 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps4bP46467 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4bP46467 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4bP46467 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Vps4bP46467 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Vps4bP46467 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4bP46467 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Vps4bP46467 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4bP46467 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4bP46467 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps4bP46467 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Vps4bP46467 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Vps4bP46467 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.95□□□□□ -0.18
Vps4bP46467 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.95□□□□□ -0.18
Vps4bP46467 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.95□□□□□ -0.18
Vps4bP46467 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.95□□□□□ -0.18
Vps4bP46467 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.95□□□□□ -0.18
Vps4bP46467 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.95□□□□□ -0.18
Vps4bP46467 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Gm15653-201ENSMUST00000119247 907 ntBASIC13.95□□□□□ -0.18
Vps4bP46467 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.95□□□□□ -0.18
Vps4bP46467 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Vps4bP46467 Gm33320-201ENSMUST00000192232 530 ntBASIC13.95□□□□□ -0.18
Vps4bP46467 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.95□□□□□ -0.18
Vps4bP46467 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.95□□□□□ -0.18
Vps4bP46467 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Vps4bP46467 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.95□□□□□ -0.18
Vps4bP46467 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.95□□□□□ -0.18
Vps4bP46467 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Vps4bP46467 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Vps4bP46467 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps4bP46467 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Vps4bP46467 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4bP46467 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4bP46467 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4bP46467 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4bP46467 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4bP46467 Mir698-201ENSMUST00000102164 109 ntBASIC13.94□□□□□ -0.18
Vps4bP46467 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps4bP46467 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms