Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdx2P43241 Gm37922-201ENSMUST00000195596 455 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Gm37497-201ENSMUST00000195830 798 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdx2P43241 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdx2P43241 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdx2P43241 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdx2P43241 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdx2P43241 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdx2P43241 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.01□□□□□ -0.33
Cdx2P43241 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13□□□□□ -0.33
Cdx2P43241 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdx2P43241 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13□□□□□ -0.33
Cdx2P43241 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13□□□□□ -0.33
Cdx2P43241 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Mir686-201ENSMUST00000102174 109 ntBASIC13□□□□□ -0.33
Cdx2P43241 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13□□□□□ -0.33
Cdx2P43241 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13□□□□□ -0.33
Cdx2P43241 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13□□□□□ -0.33
Cdx2P43241 Gm43133-201ENSMUST00000197472 463 ntBASIC13□□□□□ -0.33
Cdx2P43241 Gm44364-201ENSMUST00000198368 141 ntBASIC13□□□□□ -0.33
Cdx2P43241 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Cdx2P43241 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13□□□□□ -0.33
Cdx2P43241 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cdx2P43241 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13□□□□□ -0.33
Cdx2P43241 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdx2P43241 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdx2P43241 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdx2P43241 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdx2P43241 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdx2P43241 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdx2P43241 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdx2P43241 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdx2P43241 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.99□□□□□ -0.33
Cdx2P43241 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Cdx2P43241 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.99□□□□□ -0.33
Cdx2P43241 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.99□□□□□ -0.33
Cdx2P43241 Gm26927-201ENSMUST00000182385 965 ntBASIC12.99□□□□□ -0.33
Cdx2P43241 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdx2P43241 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Gm18935-201ENSMUST00000212692 664 ntBASIC12.99□□□□□ -0.33
Cdx2P43241 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.99□□□□□ -0.33
Cdx2P43241 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdx2P43241 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.99□□□□□ -0.33
Cdx2P43241 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdx2P43241 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx2P43241 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx2P43241 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.98□□□□□ -0.33
Cdx2P43241 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cdx2P43241 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms