Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm25880-201ENSMUST00000104331 132 ntBASIC14.28□□□□□ -0.12
HttP42859 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.28□□□□□ -0.12
HttP42859 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.28□□□□□ -0.12
HttP42859 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.28□□□□□ -0.12
HttP42859 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.28□□□□□ -0.12
HttP42859 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.28□□□□□ -0.12
HttP42859 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.28□□□□□ -0.12
HttP42859 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HttP42859 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HttP42859 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HttP42859 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HttP42859 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HttP42859 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HttP42859 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
HttP42859 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HttP42859 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.27□□□□□ -0.12
HttP42859 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.27□□□□□ -0.12
HttP42859 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HttP42859 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HttP42859 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.27□□□□□ -0.12
HttP42859 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HttP42859 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HttP42859 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HttP42859 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC14.27□□□□□ -0.13
HttP42859 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HttP42859 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
HttP42859 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HttP42859 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.27□□□□□ -0.13
HttP42859 Gm25951-201ENSMUST00000175330 64 ntBASIC14.27□□□□□ -0.13
HttP42859 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.27□□□□□ -0.13
HttP42859 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HttP42859 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HttP42859 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
HttP42859 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HttP42859 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HttP42859 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HttP42859 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HttP42859 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HttP42859 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HttP42859 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HttP42859 Gm15515-201ENSMUST00000117827 822 ntBASIC14.26□□□□□ -0.13
HttP42859 Gm15547-201ENSMUST00000122152 333 ntBASIC14.26□□□□□ -0.13
HttP42859 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HttP42859 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.26□□□□□ -0.13
HttP42859 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.26□□□□□ -0.13
HttP42859 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.26□□□□□ -0.13
HttP42859 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
HttP42859 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.26□□□□□ -0.13
HttP42859 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HttP42859 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
HttP42859 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.26□□□□□ -0.13
HttP42859 Gm22121-201ENSMUST00000175148 54 ntBASIC14.26□□□□□ -0.13
HttP42859 Gm29155-201ENSMUST00000185910 269 ntBASIC14.26□□□□□ -0.13
HttP42859 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HttP42859 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.26□□□□□ -0.13
HttP42859 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.26□□□□□ -0.13
HttP42859 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HttP42859 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
HttP42859 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.25□□□□□ -0.13
HttP42859 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.25□□□□□ -0.13
HttP42859 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HttP42859 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC14.25□□□□□ -0.13
HttP42859 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.25□□□□□ -0.13
HttP42859 Gm44651-201ENSMUST00000207343 372 ntBASIC14.25□□□□□ -0.13
HttP42859 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.25□□□□□ -0.13
HttP42859 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.25□□□□□ -0.13
HttP42859 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms