Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.49□□□□□ -0.09
Rfc1P35601 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.49□□□□□ -0.09
Rfc1P35601 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.49□□□□□ -0.09
Rfc1P35601 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.49□□□□□ -0.09
Rfc1P35601 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.49□□□□□ -0.09
Rfc1P35601 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.49□□□□□ -0.09
Rfc1P35601 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.49□□□□□ -0.09
Rfc1P35601 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.49□□□□□ -0.09
Rfc1P35601 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rfc1P35601 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rfc1P35601 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.49□□□□□ -0.09
Rfc1P35601 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfc1P35601 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Rfc1P35601 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Gm14140-201ENSMUST00000119999 995 ntBASIC14.48□□□□□ -0.09
Rfc1P35601 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.48□□□□□ -0.09
Rfc1P35601 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.48□□□□□ -0.09
Rfc1P35601 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.48□□□□□ -0.09
Rfc1P35601 Gm8584-201ENSMUST00000171982 758 ntBASIC14.48□□□□□ -0.09
Rfc1P35601 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.48□□□□□ -0.09
Rfc1P35601 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rfc1P35601 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfc1P35601 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfc1P35601 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.47□□□□□ -0.09
Rfc1P35601 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rfc1P35601 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.47□□□□□ -0.09
Rfc1P35601 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rfc1P35601 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.47□□□□□ -0.09
Rfc1P35601 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.47□□□□□ -0.09
Rfc1P35601 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.47□□□□□ -0.09
Rfc1P35601 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rfc1P35601 Gm2272-201ENSMUST00000194903 582 ntBASIC14.47□□□□□ -0.09
Rfc1P35601 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.47□□□□□ -0.09
Rfc1P35601 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Rfc1P35601 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfc1P35601 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfc1P35601 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms