Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Mmp13P33435 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.09□□□□□ -0.15
Mmp13P33435 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Mmp13P33435 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.09□□□□□ -0.15
Mmp13P33435 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.09□□□□□ -0.15
Mmp13P33435 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.09□□□□□ -0.15
Mmp13P33435 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Mmp13P33435 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mmp13P33435 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Mmp13P33435 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Mmp13P33435 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Mmp13P33435 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.08□□□□□ -0.15
Mmp13P33435 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.08□□□□□ -0.15
Mmp13P33435 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Mmp13P33435 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Mmp13P33435 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Mmp13P33435 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.08□□□□□ -0.16
Mmp13P33435 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.08□□□□□ -0.16
Mmp13P33435 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Mmp13P33435 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Mmp13P33435 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Mmp13P33435 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp13P33435 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Mmp13P33435 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Mmp13P33435 Gm6222-201ENSMUST00000120787 396 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.07□□□□□ -0.16
Mmp13P33435 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Gm9719-201ENSMUST00000162765 543 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Mmp13P33435 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Gm27618-201ENSMUST00000183671 60 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm29310-201ENSMUST00000185468 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21825-201ENSMUST00000185728 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm29109-201ENSMUST00000185895 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21896-201ENSMUST00000186520 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21873-201ENSMUST00000186728 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21794-201ENSMUST00000187056 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21880-201ENSMUST00000187275 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21826-201ENSMUST00000187451 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21198-201ENSMUST00000188393 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21749-201ENSMUST00000189343 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21901-201ENSMUST00000189568 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm29424-201ENSMUST00000189716 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm28599-201ENSMUST00000189838 694 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21867-201ENSMUST00000189917 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm29269-201ENSMUST00000190087 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21722-201ENSMUST00000190153 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm28423-201ENSMUST00000190701 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21899-201ENSMUST00000190745 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21910-201ENSMUST00000191163 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21849-201ENSMUST00000191571 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm28678-201ENSMUST00000191593 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm20910-201ENSMUST00000193268 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Gm21871-201ENSMUST00000194621 696 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.07□□□□□ -0.16
Mmp13P33435 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Mmp13P33435 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp13P33435 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms