Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
P20040 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.24□□□□□ -0.45
P20040 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.24□□□□□ -0.45
P20040 Gm18766-201ENSMUST00000189811 808 ntBASIC12.24□□□□□ -0.45
P20040 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.24□□□□□ -0.45
P20040 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
P20040 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P20040 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P20040 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.23□□□□□ -0.45
P20040 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.23□□□□□ -0.45
P20040 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.23□□□□□ -0.45
P20040 Auts2-212ENSMUST00000178555 309 ntBASIC12.23□□□□□ -0.45
P20040 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P20040 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P20040 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P20040 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
P20040 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P20040 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.22□□□□□ -0.45
P20040 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
P20040 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
P20040 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.22□□□□□ -0.45
P20040 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
P20040 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.22□□□□□ -0.45
P20040 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
P20040 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.22□□□□□ -0.45
P20040 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.22□□□□□ -0.45
P20040 Gm13823-201ENSMUST00000119930 345 ntBASIC12.22□□□□□ -0.45
P20040 Gm25144-201ENSMUST00000179561 110 ntBASIC12.22□□□□□ -0.45
P20040 Gm25352-201ENSMUST00000179815 110 ntBASIC12.22□□□□□ -0.45
P20040 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.22□□□□□ -0.45
P20040 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.22□□□□□ -0.45
P20040 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
P20040 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P20040 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms