Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3cP02301 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3cP02301 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3cP02301 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3cP02301 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3cP02301 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3cP02301 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.83□□□□□ -0.52
H3f3cP02301 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3cP02301 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H3f3cP02301 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H3f3cP02301 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
H3f3cP02301 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
H3f3cP02301 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H3f3cP02301 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Matn2-206ENSMUST00000228570 2798 ntBASIC11.82□□□□□ -0.52
H3f3cP02301 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H3f3cP02301 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H3f3cP02301 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Gm12151-201ENSMUST00000121374 290 ntBASIC11.82□□□□□ -0.52
H3f3cP02301 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.82□□□□□ -0.52
H3f3cP02301 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.82□□□□□ -0.52
H3f3cP02301 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.82□□□□□ -0.52
H3f3cP02301 Gm27838-201ENSMUST00000184829 128 ntBASIC11.82□□□□□ -0.52
H3f3cP02301 Gm20949-201ENSMUST00000206478 952 ntBASIC11.82□□□□□ -0.52
H3f3cP02301 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
H3f3cP02301 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.82□□□□□ -0.52
H3f3cP02301 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
H3f3cP02301 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
H3f3cP02301 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
H3f3cP02301 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H3f3cP02301 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
H3f3cP02301 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.81□□□□□ -0.52
H3f3cP02301 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H3f3cP02301 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
H3f3cP02301 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.81□□□□□ -0.52
H3f3cP02301 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.81□□□□□ -0.52
H3f3cP02301 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H3f3cP02301 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
H3f3cP02301 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.81□□□□□ -0.52
H3f3cP02301 Gm5425-201ENSMUST00000214125 459 ntBASIC11.81□□□□□ -0.52
H3f3cP02301 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.81□□□□□ -0.52
H3f3cP02301 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
H3f3cP02301 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.81□□□□□ -0.52
H3f3cP02301 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.81□□□□□ -0.52
H3f3cP02301 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
H3f3cP02301 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
H3f3cP02301 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H3f3cP02301 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H3f3cP02301 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms