Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Smarce1O54941 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.34■□□□□ 0.21
Smarce1O54941 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Smarce1O54941 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Gm22065-201ENSMUST00000103753 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm22066-201ENSMUST00000103761 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm24932-201ENSMUST00000103763 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm24115-201ENSMUST00000103799 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm22190-201ENSMUST00000103827 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm22191-201ENSMUST00000103831 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm24721-201ENSMUST00000103849 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm28018-201ENSMUST00000103869 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm26399-201ENSMUST00000103937 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.34■□□□□ 0.21
Smarce1O54941 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.34■□□□□ 0.21
Smarce1O54941 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Smarce1O54941 Gm25349-201ENSMUST00000177728 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm23616-201ENSMUST00000177797 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm25871-201ENSMUST00000177816 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm24752-201ENSMUST00000178240 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm24496-201ENSMUST00000178287 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm25649-201ENSMUST00000178476 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm25548-201ENSMUST00000178681 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm23147-201ENSMUST00000178841 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm26095-201ENSMUST00000179270 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm22171-201ENSMUST00000179283 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm23936-201ENSMUST00000179354 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm22619-201ENSMUST00000179516 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm25255-201ENSMUST00000179579 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm24755-201ENSMUST00000179691 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm26506-201ENSMUST00000179692 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm25086-201ENSMUST00000179931 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm23243-201ENSMUST00000180047 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm24659-201ENSMUST00000180212 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm24169-201ENSMUST00000180244 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm23689-201ENSMUST00000180354 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm27359-201ENSMUST00000184153 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm27785-201ENSMUST00000184268 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm27466-201ENSMUST00000184396 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Gm27703-201ENSMUST00000184836 110 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.34■□□□□ 0.21
Smarce1O54941 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.34■□□□□ 0.21
Smarce1O54941 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.34■□□□□ 0.21
Smarce1O54941 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Smarce1O54941 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarce1O54941 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.34■□□□□ 0.21
Smarce1O54941 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarce1O54941 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.33■□□□□ 0.21
Smarce1O54941 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarce1O54941 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Smarce1O54941 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Smarce1O54941 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Smarce1O54941 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Gm24158-201ENSMUST00000175263 71 ntBASIC16.33■□□□□ 0.2
Smarce1O54941 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.33■□□□□ 0.2
Smarce1O54941 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Smarce1O54941 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Smarce1O54941 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.33■□□□□ 0.2
Smarce1O54941 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smarce1O54941 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.33■□□□□ 0.2
Smarce1O54941 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Smarce1O54941 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarce1O54941 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Smarce1O54941 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarce1O54941 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms