Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Lsm2O35900 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.24□□□□□ -0.45
Lsm2O35900 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.24□□□□□ -0.45
Lsm2O35900 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm2O35900 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm2O35900 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.24□□□□□ -0.45
Lsm2O35900 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.24□□□□□ -0.45
Lsm2O35900 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm2O35900 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm2O35900 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lsm2O35900 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.24□□□□□ -0.45
Lsm2O35900 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm2O35900 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm2O35900 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm2O35900 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm2O35900 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm2O35900 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm2O35900 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm2O35900 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm2O35900 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lsm2O35900 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm2O35900 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Lsm2O35900 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.23□□□□□ -0.45
Lsm2O35900 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm2O35900 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Lsm2O35900 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm2O35900 Gm11452-201ENSMUST00000122376 690 ntBASIC12.23□□□□□ -0.45
Lsm2O35900 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.23□□□□□ -0.45
Lsm2O35900 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
Lsm2O35900 AA543401-201ENSMUST00000164248 1269 ntBASIC12.23□□□□□ -0.45
Lsm2O35900 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm2O35900 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm2O35900 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.23□□□□□ -0.45
Lsm2O35900 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lsm2O35900 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.23□□□□□ -0.45
Lsm2O35900 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lsm2O35900 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm2O35900 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lsm2O35900 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.22□□□□□ -0.45
Lsm2O35900 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Lsm2O35900 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.22□□□□□ -0.45
Lsm2O35900 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Lsm2O35900 Gm18027-201ENSMUST00000218947 619 ntBASIC12.22□□□□□ -0.45
Lsm2O35900 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lsm2O35900 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.22□□□□□ -0.45
Lsm2O35900 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lsm2O35900 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.22□□□□□ -0.45
Lsm2O35900 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lsm2O35900 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.22□□□□□ -0.45
Lsm2O35900 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lsm2O35900 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.22□□□□□ -0.45
Lsm2O35900 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm2O35900 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.21□□□□□ -0.45
Lsm2O35900 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lsm2O35900 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms