Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cx3cl1O35188 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.95□□□□□ -0.34
Cx3cl1O35188 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cx3cl1O35188 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Gm29741-201ENSMUST00000192667 421 ntBASIC12.94□□□□□ -0.34
Cx3cl1O35188 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.94□□□□□ -0.34
Cx3cl1O35188 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.93□□□□□ -0.34
Cx3cl1O35188 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Gm5866-201ENSMUST00000177881 973 ntBASIC12.93□□□□□ -0.34
Cx3cl1O35188 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.93□□□□□ -0.34
Cx3cl1O35188 Gm44855-201ENSMUST00000205725 362 ntBASIC12.93□□□□□ -0.34
Cx3cl1O35188 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.93□□□□□ -0.34
Cx3cl1O35188 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Gm2423-201ENSMUST00000074863 733 ntBASIC12.93□□□□□ -0.34
Cx3cl1O35188 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cx3cl1O35188 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.92□□□□□ -0.34
Cx3cl1O35188 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Gm6912-201ENSMUST00000117218 544 ntBASIC12.92□□□□□ -0.34
Cx3cl1O35188 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.92□□□□□ -0.34
Cx3cl1O35188 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Cx3cl1O35188 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms