Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx4O35137 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Alx4O35137 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx4O35137 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Alx4O35137 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.28□□□□□ -0.44
Alx4O35137 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx4O35137 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx4O35137 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx4O35137 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx4O35137 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx4O35137 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx4O35137 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx4O35137 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx4O35137 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Alx4O35137 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.28□□□□□ -0.44
Alx4O35137 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Alx4O35137 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx4O35137 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Alx4O35137 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.27□□□□□ -0.44
Alx4O35137 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Alx4O35137 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx4O35137 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx4O35137 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx4O35137 Syt7-205ENSMUST00000224135 1557 ntBASIC12.27□□□□□ -0.44
Alx4O35137 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.27□□□□□ -0.44
Alx4O35137 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Alx4O35137 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx4O35137 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx4O35137 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Alx4O35137 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Alx4O35137 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.27□□□□□ -0.45
Alx4O35137 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Mir3113-201ENSMUST00000175478 76 ntBASIC12.27□□□□□ -0.45
Alx4O35137 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.27□□□□□ -0.45
Alx4O35137 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.27□□□□□ -0.45
Alx4O35137 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.27□□□□□ -0.45
Alx4O35137 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.27□□□□□ -0.45
Alx4O35137 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.27□□□□□ -0.45
Alx4O35137 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Alx4O35137 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Alx4O35137 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.27□□□□□ -0.45
Alx4O35137 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Alx4O35137 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.27□□□□□ -0.45
Alx4O35137 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.26□□□□□ -0.45
Alx4O35137 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Alx4O35137 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Alx4O35137 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Alx4O35137 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.26□□□□□ -0.45
Alx4O35137 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.26□□□□□ -0.45
Alx4O35137 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Alx4O35137 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.26□□□□□ -0.45
Alx4O35137 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.26□□□□□ -0.45
Alx4O35137 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.26□□□□□ -0.45
Alx4O35137 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Gm18049-201ENSMUST00000208909 581 ntBASIC12.26□□□□□ -0.45
Alx4O35137 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Alx4O35137 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.26□□□□□ -0.45
Alx4O35137 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.26□□□□□ -0.45
Alx4O35137 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.26□□□□□ -0.45
Alx4O35137 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Alx4O35137 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Alx4O35137 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.25□□□□□ -0.45
Alx4O35137 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Alx4O35137 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Alx4O35137 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms