Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Gm12887B1AVM1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Thap2-203ENSMUST00000218989 527 ntBASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Rps4l-201ENSMUST00000071745 943 ntBASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gm12887B1AVM1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.1□□□□□ -0.63
Gm12887B1AVM1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Gm44608-201ENSMUST00000206827 855 ntBASIC11.1□□□□□ -0.63
Gm12887B1AVM1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.1□□□□□ -0.63
Gm12887B1AVM1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms