Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Gm24420-201ENSMUST00000176676 59 ntBASIC11.59□□□□□ -0.55
Col6a4A2AX52 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Gm27772-201ENSMUST00000184900 187 ntBASIC11.59□□□□□ -0.55
Col6a4A2AX52 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.59□□□□□ -0.55
Col6a4A2AX52 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col6a4A2AX52 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col6a4A2AX52 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.58□□□□□ -0.56
Col6a4A2AX52 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.58□□□□□ -0.56
Col6a4A2AX52 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.58□□□□□ -0.56
Col6a4A2AX52 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Col6a4A2AX52 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Gm12203-201ENSMUST00000118235 598 ntBASIC11.58□□□□□ -0.56
Col6a4A2AX52 Gm12209-201ENSMUST00000120089 596 ntBASIC11.58□□□□□ -0.56
Col6a4A2AX52 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Gm26927-201ENSMUST00000182385 965 ntBASIC11.58□□□□□ -0.56
Col6a4A2AX52 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.58□□□□□ -0.56
Col6a4A2AX52 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.58□□□□□ -0.56
Col6a4A2AX52 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.58□□□□□ -0.56
Col6a4A2AX52 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.58□□□□□ -0.56
Col6a4A2AX52 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a4A2AX52 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a4A2AX52 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms