Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col9a3A2ACT7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Gm38266-201ENSMUST00000194931 421 ntBASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Gm10146-201ENSMUST00000072739 309 ntBASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col9a3A2ACT7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Gm18827-201ENSMUST00000188341 790 ntBASIC13.34□□□□□ -0.27
Col9a3A2ACT7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Gm4857-201ENSMUST00000192718 785 ntBASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Gm38144-201ENSMUST00000192790 465 ntBASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Gm43758-201ENSMUST00000199500 367 ntBASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Gm6334-201ENSMUST00000207083 228 ntBASIC13.34□□□□□ -0.27
Col9a3A2ACT7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col9a3A2ACT7 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.33□□□□□ -0.27
Col9a3A2ACT7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col9a3A2ACT7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Gm13342-201ENSMUST00000121055 207 ntBASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Gm43133-201ENSMUST00000197472 463 ntBASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Gm3961-201ENSMUST00000204425 994 ntBASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Gm18935-201ENSMUST00000212692 664 ntBASIC13.33□□□□□ -0.28
Col9a3A2ACT7 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col9a3A2ACT7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms